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from datetime import datetime, timezone
from os.path import join as pjoin
from pathlib import Path
from uuid import uuid4
import dask.dataframe as dd
import pandas as pd
import pytest
from pydantic import ValidationError
from generalresearch.incite.base import CollectionItemBase
class TestCollectionItemBase:
def test_init(self):
dt = datetime.now(tz=timezone.utc).replace(microsecond=0)
instance = CollectionItemBase()
instance2 = CollectionItemBase(start=dt)
assert isinstance(instance, CollectionItemBase)
assert isinstance(instance2, CollectionItemBase)
assert instance.start.second == instance2.start.second
assert 0 == instance.start.microsecond == instance2.start.microsecond
def test_init_start(self):
dt = datetime.now(tz=timezone.utc)
with pytest.raises(expected_exception=ValidationError) as cm:
CollectionItemBase(start=dt)
assert "CollectionItem.start must not have microsecond precision" in str(
cm.value
)
class TestCollectionItemBaseProperties:
def test_finish(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.finish
def test_interval(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.interval
def test_filename(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=NotImplementedError) as cm:
res = instance.filename
assert "Do not use CollectionItemBase directly" in str(cm.value)
def test_partial_filename(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=NotImplementedError) as cm:
res = instance.filename
assert "Do not use CollectionItemBase directly" in str(cm.value)
def test_empty_filename(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=NotImplementedError) as cm:
res = instance.filename
assert "Do not use CollectionItemBase directly" in str(cm.value)
def test_path(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.path
def test_partial_path(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.partial_path
def test_empty_path(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.empty_path
class TestCollectionItemBaseMethods:
@pytest.mark.skip
def test_next_numbered_path(self):
pass
@pytest.mark.skip
def test_search_highest_numbered_path(self):
pass
def test_tmp_filename(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=NotImplementedError) as cm:
res = instance.tmp_filename()
assert "Do not use CollectionItemBase directly" in str(cm.value)
def test_tmp_path(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.tmp_path()
def test_is_empty(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.is_empty()
def test_has_empty(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.has_empty()
def test_has_partial_archive(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.has_partial_archive()
@pytest.mark.parametrize("include_empty", [True, False])
def test_has_archive(self, include_empty):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.has_archive(include_empty=include_empty)
def test_delete_archive_file(self, mnt_filepath):
path1 = Path(pjoin(mnt_filepath.data_src, f"{uuid4().hex}.zip"))
# Confirm it doesn't exist, and that delete_archive() doesn't throw
# an error when trying to delete a non-existent file or folder
assert not path1.exists()
CollectionItemBase.delete_archive(generic_path=path1)
# TODO: LOG.warning(f"tried removing non-existent file: {generic_path}")
# Create it, confirm it exists, delete it, and confirm it doesn't exist
path1.touch()
assert path1.exists()
CollectionItemBase.delete_archive(generic_path=path1)
assert not path1.exists()
def test_delete_archive_dir(self, mnt_filepath):
path1 = Path(pjoin(mnt_filepath.data_src, f"{uuid4().hex}"))
# Confirm it doesn't exist, and that delete_archive() doesn't throw
# an error when trying to delete a non-existent file or folder
assert not path1.exists()
CollectionItemBase.delete_archive(generic_path=path1)
# TODO: LOG.warning(f"tried removing non-existent file: {generic_path}")
# Create it, confirm it exists, delete it, and confirm it doesn't exist
path1.mkdir()
assert path1.exists()
assert path1.is_dir()
CollectionItemBase.delete_archive(generic_path=path1)
assert not path1.exists()
def test_should_archive(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.should_archive()
def test_set_empty(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.set_empty()
def test_valid_archive(self):
instance = CollectionItemBase()
with pytest.raises(expected_exception=AttributeError) as cm:
res = instance.valid_archive(generic_path=None, sample=None)
class TestCollectionItemBaseMethodsORM:
@pytest.mark.skip
def test_from_archive(self):
pass
@pytest.mark.parametrize("is_partial", [True, False])
def test_to_archive(self, is_partial):
instance = CollectionItemBase()
with pytest.raises(expected_exception=NotImplementedError) as cm:
res = instance.to_archive(
ddf=dd.from_pandas(data=pd.DataFrame()), is_partial=is_partial
)
assert "Must override" in str(cm.value)
@pytest.mark.skip
def test__to_dict(self):
pass
@pytest.mark.skip
def test_delete_partial(self):
pass
@pytest.mark.skip
def test_cleanup_partials(self):
pass
@pytest.mark.skip
def test_delete_dangling_partials(self):
pass
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